|
Neurotransmitter System and Gene Name |
Gene Symbol |
Location in Human Genome |
| Serotonin system | ||
| Tryptophan Hydroxylase | TPH | 11p15.3-p14 |
| 5-Hydroxytryptamine Transporter (Solute Carrier Family 6, Member 4) | SLC6A4 | 17q11.1-q12 |
| Monoamine Oxidase A | MAOA | Xp11.23 |
| Monoamine Oxidase B | MAOB | Xp11.23 |
| 5-Hydroxytryptamine Receptor 1A | HTR1A | 5q11.2-q13 |
| 5-Hydroxytryptamine Receptor 1B | HTR1B | 6q13 |
| 5-Hydroxytryptamine Receptor 1D | HTR1D | 1p36.3-p34.3 |
| 5-Hydroxytryptamine Receptor 1E | HTR1E | 6q14-q15 |
| 5-Hydroxytryptamine Receptor 1F | HTR1F | 3p12 |
| 5-Hydroxytryptamine Receptor 2A | HTR2A | 13q14-q21 |
| 5-Hydroxytryptamine Receptor 2B | HTR2B | 2q36.3-q37.1 |
| 5-Hydroxytryptamine Receptor 2C | HTR2C | Xq24 |
| 5-Hydroxytryptamine Receptor 3A | HTR3A | 11q23.1-q23.2 |
| 5-Hydroxytryptamine Receptor 3B | HTR3B | 11q23.1 |
| 5-Hydroxytryptamine Receptor 4 | HTR4 | 5q31-q33 |
| 5-Hydroxytryptamine Receptor 5A | HTR5A | 7q36.1 |
| 5-Hydroxytryptamine Receptor 6 | HTR6 | 1p36-p35 |
| 5-Hydroxytryptamine Receptor 7 | HTR7 | 10q21-q24 |
| Dopaminergic | ||
| Dopamine Receptor D1 | DRD1 | 5q35.1 |
| Dopamine Receptor D2 | DRD2 | 11q23 |
| Dopamine Receptor D3 | DRD3 | 3q13.3 |
| Dopamine Receptor D4 | DRD4 | 11p15.5 |
| Dopamine Receptor D5 | DRD5 | 4p16.1-p15.3 |
| Dopamine Receptor-Interacting Protein, 78-Kd | ||
| Kruppel-Like Factor 16 | KLF16 | |
|
Dopamine Transporter (Solute Carrier Family 6 Member 3) |
SLC6A3 | 5p15.3 |
| dopamine beta-hydroxylase | DBH | 9q34 |
| Tyrosine hydroxilase TH | TH | 11p15.5 |
| Catehol-O-methyltransferase | COMT | 22q11.2 |
| GABA system | ||
| Glutamate Decarboxylase 1 | GAD1 | 2q31 |
| 4-Aminobutyrate Aminotransferase | ABAT | 16p13.3 |
| GABA Transporter (Solute Carrier Family 6, Member 1) | SLC6A1 | 3p25-p24 |
| Gamma-Aminobutyric Acid B Receptor 1; | GABBR1 | |
| Gamma-Aminobutyric Acid Receptor, Alpha-1 | GABRA1 | 5q34-q35 |
| Gamma-Aminobutyric Acid Receptor, Alpha-2; | GABRA2 | 4p13-p12 |
| Gamma-Aminobutyric Acid Receptor, Alpha-3; | GABRA3 | Xq28 |
| Gamma-Aminobutyric Acid Receptor, Alpha-4; | GABRA4 | 4p14-q12 |
| Gamma-Aminobutyric Acid Receptor, Alpha-5; | GABRA5 | 15q11.2-q12 |
| Gamma-Aminobutyric Acid Receptor, Alpha-6; | GABRA6 | 5q31.1-q35 |
| Gamma-Aminobutyric Acid Receptor, Beta-1; | GABRB1 | 4p13-p12 |
| Gamma-Aminobutyric Acid Receptor, Beta-2; | GABRB2 | 5q34-q35 |
| Gamma-Aminobutyric Acid Receptor, Beta-3; | GABRB3 | 15q11.2-q12 |
| Gamma-Aminobutyric Acid Receptor, Gamma-1 | GABRG1 | 4p14-q21.1 |
| Gamma-Aminobutyric Acid Receptor, Gamma-2 | GABRG2 | 5q31.1-q33.1 |
| Gamma-Aminobutyric Acid Receptor, Gamma-3; | GABRG3 | 15q11.2-q12 |
| Gamma-Aminobutyric Acid Receptor, Delta; | GABRD | 1p36.3 |
| Gamma-Aminobutyric Acid Receptor, Epsilon; | GABRE | Xq28 |
| Gamma-Aminobutyric Acid Receptor, Theta; | GABRQ | Xq28 |
| Gamma-Aminobutyric Acid Receptor, PI; | GABRP | 5q32-q33 |
| Gaba-A Receptor-Associated Protein; | GABARAP | |
| Gamma-Aminobutyric Acid Receptor Subunit RHO1 | 6q14-q21 | |
| Gamma-Aminobutyric Acid Receptor Subunit RHO2 | 6q14-q21 | |
| Hypothalamic/Pituitary Axis, including Corticotropin and Vasopressin/Oxytocin systems | ||
| Corticotropin-Releasing Hormone | CRH | 8q13 |
| Corticotropin Releasing Hormone-Binding Protein | CRHBP | 5q11.2-q13.3 |
| Corticotropin-Releasing Hormone Receptor 1 | CRHR1 | 17q12-q22 |
| Corticotropin-Releasing Hormone Receptor 2 | CRHR2 | 7p21-p15 |
| Arginine Vasopressin | AVP | 20p13 |
| Arginine Vasopressin Receptor 1A | AVPR1A | 12q14-q15 |
| Arginine Vasopressin Receptor 1B | AVPR1B | 1q32 |
| Arginine Vasopressin Receptor 2 | AVPR2 | Xq28 |
| Oxytocin--Neurophysin I | OXT | 20p13 |
| Prodynorphin | PDYN | 20pter-p12.2 |
| Noradrenergic system | ||
| adrenergic alpha-2A receptor | ADRA2A | 10q24-q26 |
| adrenergic alpha-2C receptor | ADRA2C | 4p16.1 |
Table 2.
A primary marker set of 400 microsatellite markers to map the fox genome.
Selected microsatellite markers working robustly on fox DNA have been adapted from markers mapped in the dog (Kukekova et al., 2003). The mapping set covers the anticipated fox linkage groups completely and uniformly as predicted by comparison of the integrated canine genome map (Breen et al., 2001; Yang et al., 1999, 2000)
| Canine Chromosome | Marker identification (* = marker in Marshfield set); Sequenced markers are underlined; markers which require Tm 55°C are in italics 61°C are in italics and underlined |
| CFA1 | REN47D17*, C01.673*, FH2294*, FH2016*, FH2598*, FH2309 *, FH2109U*, D01505*, C01.424 *, AHTK338, REN242N13, REN162B09, REN112I02, DGN3, REN123E09, C01.251, ARGES, REN06N11, C02509, PGKAM, FH2452, FH2634, FH2326, REN229P15, REN162B09, C01.246 |
| CFA2 | FH2225*, FH2608 *, FH2613 *, FH2087U*, REN150M24*, AHT111*, FH3006*, C02.894*, C2.342, FH2274, REN149E24, REN303H07, REN280B15, FH2237, C02.030, REN315H04, FH2062, FH2132 |
| CFA3 | FH2131*, C03.895*, CPH19*, PEZ12*, FH2541 *, FH2302 *, FH2137*, FH2531, REN161A12, FH2316, ZUBECA4, REN157C08, REN260i04, REN216N05, REN73P04, C00802 |
| CFA4 | FH2097 *, FH2142*, REN298N18*, REN160J02*, AHT103*, FH2412*, FH2534*, FH2457 *, PEZ17, REN79O09, REN282C02 |
| CFA5 | FH2140*, REN42N13*, REN265H13*, C05.771*, REN192M20*, REN92G21, AHTH248, REN78M01, REN175P10, AHTK315, REN122J03, TAT, C05.377*, CPH18 *, CPH14*, ZUBECA6* |
| CFA6 | FH2561*, C06.636 * , REN149M14*, REN152F02 , FH2576, REN210i14, REN84K01, FH2164*, REN88M24, REN54C11, FH2370 |
| CFA7 | C09703*, REN162C04*, REN149P06*, FH2581*, 1B10*, VIASD10*, FH2174 *, FH2201 *, C07.620 , FH2301*, REN200G14, REN99O20, REN286L19, REN69B24, FH2226, C09703 |
| CFA8 | C08.410 *, FH2144 *, PEZ11*, AHTH240*, REN288F11*, C08.618*, REN67O13, REN68M10, REN206K11, REN268I01, REN108A18, REN178J05, REN148E17, CMA1, |
| CFA9 | REN198P23*, FH2186 *, FH2248 , FH2263*, REN278L10 *, REN75M10* , REN256F13, REN42F01, REN54L20 , REN144L19, G06401, REN126A15, MPO, REN145P07 , KRT9 |
| CFA10 | FH2293 *, FH2422*, ZUBECA1*, FH2537*, C10.16*, C10.602*, C10.781 , C10.606, REN171O24, DGN8A, RVC8, REN181G20, REN271K09, DTRCN5, REN73F08, REN04F08 |
| CFA11 | AHT137*, REN147O02*, C11.873*, FH2019*, REN207M19, REN181F15, FH2004, REN245N06, REN161D14, REN105L03, C11.868, REN194N17, DTRCN4, REN57H24 |
| CFA12 | C05101*, FH2401*, C12.852*, FH2054 *, FH2152*, C07003*, C12.406*, REN211B14, PEZ5*, REN170E21, REN213F01, REN258L11, REN153O12, REN194P04, REN89A22, REN208M20, C00104, REN234K01 |
| CFA13 | REN307K04*, REN65L04*, AHT121*, REN166I13*, REN238L19, REN165L17, REN13N11, DTRCN6, REN154P17, REN107M21, REN66K24, REN227M12, C13.758, FH2348 |
| CFA14 | REN169D01*, FH2547*, C14.866*, REN289L09*, FH2258*, PEZ10*, FH2600 , REN141P20 |
| CFA15 | REN230G12*, AHT139*, FH2088*, FH2360*, REN06C11*, FH2535*, RVC1*, REN303E22*, REN307J23, REN265J03, REN143N23, REN159B09, CPH4, REN144M10, REN204N22, FH2295, REN123N11, FH2295 |
| CFA16 | FH2175*, C16.436 , C16.147*, FH2175*, FH2155, REN96i08, REN275L19, REN54I19, REN210K18 |
| CFA17 | PEZ8*, REN50B03*, REN310J13*, FH2321*, REN240A05, CPH10 |
| CFA18 | REN183B03*, FH3010*, AHT130*, REN42L13*, REN47J11*, REN186N13, REN50L03, REN248C19, REN266I17, FH2429 *, C18.460 |
| CFA19 | REN91I14*, FH2380*, FH2279*, PEZ3*, CPH8, REN213G21, REN212E22 |
| CFA20 | CPH16*, FH2158*, FH2528*, C20.622*, REN93E07, PEZ19, REN119P03, REN124F16, REN130E03, REN250B12, DGN14, DAG1, FH2365, FH2365 |
| CFA21 | FH2603*, REN285A14*, FH2312*, FH2233*, REN118B15, REN68M20, CCKBR |
| CFA22 | REN262G14*, C22.279*, REN107H05*, REN42F10*, FH2538*, FH2109L* |
| CFA23 | C23.745*, FH2508*, FH2626*, FH2001*, REN46F18*, REN210D03, CPH6 |
| CFA24 | AHT125*, FH2168*, FH2010, REN272I16, FH2495, FH2281, FH2261 |
| CFA25 | REN166C13*, FH2318*, REN54E19, FH2526*, AHT140*, FH2006*, C25.213*, FH2318*, FH2324*, FH2087L* |
| CFA26 | C26.733*, REN01O23*, N41*, AHTK211*, DTRCN9, REN299M21, REN48E01 |
| CFA27 | PEZ6*, REN277O05*, LEI002*, REN208N23*, FH2289 *, C27.442 *, PEZ16, C27.502, REN65A09, FH2346, SLC6A12, DRPLA, VDR |
| CFA28 | DTRCN14*, REN51i12*, REN309N19*, FH2585*, C28.176*, REN146G17*, REN73i23, C28.434 |
| CFA29 | CPH9*, REN45F03*, FH2328*, C29.883, C29.002, FH2364 |
| CFA30 | REN245M07*, REN105I08*, REN50N18*, REN248F14*, FH2050*, LEI-1F11*, C30.204 |
| CFA31 | REN265M13*, FH2189*, REN43H24*, REN239G04*, REN50I04 |
| CFA32 | AHT127*, CPH2*, REN244E04, D03908, UOR0421 |
| CFA33 | FH2507*, REN98D17*, REN291M20*, FH2165*, FH2361*, REN186B12, REN211M13 |
| CFA34 | REN160M18*, REN53L08*, REN314H10*, FH2377*, REN125M11 |
| CFA35 | REN01G01*, REN214H22*, REN94K23*, REN172L08* |
| CFA36 | REN85C13*, FH2611* |
| CFA37 | AHT133*, H10101*, AHT135* |
| CFA38 | AHTH91*, RENo2C20*, REN86G15*, REN164E17*, REN312K09 |
| CFAX | FH3027*, REN130F03*, F9, FH2584*, FH2916, SSR4, FH2548 |
| Unassigned or unpublished | FH3019, FH3367, FH2658, AHTK248 |
Breen M, Jouquand S, Renier C, Mellersh CS, Hitte C, Holmes NG, Cheron A, Suter N, Vignaux F, Bristow AE, Priat C, McCann E, Andre C, Boundy S, Gitsham P, Thomas R, Bridge WL, Spriggs HF, Ryder EJ, Curson A, Sampson J, Ostrander EA, Binns MM, Galibert F. Chromosome-specific single-locus FISH probes allow anchorage of an 1800-marker integrated radiation-hybrid/linkage map of the domestic dog genome to all chromosomes. Genome Res. 2001 Oct;11(10):1784-95.
Kukekova AV, Trut LN, Oskina IN, Kharlamova AV, Shikhevich SG, Kirkness EF, Aguirre GD, Acland GM. A marker set for construction of a genetic map of the silver fox (Vulpes vulpes). 2003 Submitted to Genetical Research.
Yang F, O'Brien PC, Milne BS, Graphodatsky AS, Solanky N, Trifonov V, Rens W, Sargan D, Ferguson-Smith MA. A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps. Genomics. 1999 Dec 1;62(2):189-202.
Yang F, Milne BS, Schelling C, Dolf G, Schlapfer J, Switonski M, Ladon D, Pienkowska A, Bosma AA, Sargan DR, Ferguson-Smith MA. Chromosome identification and assignment of DNA clones in the dog using a red fox and dog comparative map. Chromosome Res. 2000 8(2):93-100.