Workshops

Next Generation Sequencing Workshop
March 10 - April 21 2010

Week 4 (April 7)
Desktop or online service applications. Emphasis will be on providing non-programmers with the tools needed for basic analysis of nextgen sequencing data.

This session will be longer than others, it will start at 3:00pm and end at 5:00pm.

There is an online discussion forum set up for this workshop. Workshop announcements will be posted there, and it is the best place to ask any workshop related questions, all teachers and organizers will be monitoring this forum closely. Workshop participants will need to register on forum website to obtain forum id before posting.

Week 4 data files:
public directories ftp://cbsuftp.tc.cornell.edu/ngw2010/session4
protected directories ftp://usr@cbsuftp.tc.cornell.edu/ngw2010p/session4
NOTE: User id and password to access protected files have been e-mailed to registered participants. Replace "usr" in the link above with the user id you received.

Lecture 1. Desktop application: NextGENe from Softgenetics.
Speaker: Presentation by company representative (in person).

Lecture 1 slides.

Lecture 2. Online service with web and programmatic access: GenomeQuest.

Speaker: Presentation by company representative (in person).

Lecture 2 slides.

Website credentials:

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